Datasets:

---

tumor-vqa

/

DeepTumorVQA_1.0

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Tumor VQA Benchmark 7

Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 17 new columns ({'question subtype', 'contrast', 'spacing', 'multiple-choice question', 'shape', 'question type', 'lesion', 'Question ID', 'split', 'age', 'question', 'sex', 'scanner', 'answer', 'correct option', 'organ', 'Image ID'}) and 2 missing columns ({'original id', 'AbdomenAtlas_id'}).

This happened while the csv dataset builder was generating data using

hf://datasets/tumor-vqa/DeepTumorVQA_1.0/Tumor_VQA_dataset_V3.csv (at revision 2557a8ccb9db849c7ac8983ed2f6b760bac86253)

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1871, in _prepare_split_single
                  writer.write_table(table)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 643, in write_table
                  pa_table = table_cast(pa_table, self._schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2293, in table_cast
                  return cast_table_to_schema(table, schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2241, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              Question ID: int64
              Image ID: string
              spacing: string
              shape: string
              sex: string
              age: double
              scanner: string
              contrast: string
              question: string
              answer: string
              multiple-choice question: string
              correct option: string
              organ: string
              lesion: string
              question type: string
              question subtype: string
              split: string
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 2259
              to
              {'original id': Value(dtype='string', id=None), 'AbdomenAtlas_id': Value(dtype='string', id=None)}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1433, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1050, in convert_to_parquet
                  builder.download_and_prepare(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 925, in download_and_prepare
                  self._download_and_prepare(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1001, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1742, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1873, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 17 new columns ({'question subtype', 'contrast', 'spacing', 'multiple-choice question', 'shape', 'question type', 'lesion', 'Question ID', 'split', 'age', 'question', 'sex', 'scanner', 'answer', 'correct option', 'organ', 'Image ID'}) and 2 missing columns ({'original id', 'AbdomenAtlas_id'}).
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/tumor-vqa/DeepTumorVQA_1.0/Tumor_VQA_dataset_V3.csv (at revision 2557a8ccb9db849c7ac8983ed2f6b760bac86253)
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)