---
title: Critical Deep Resarch
emoji: 🐉
colorFrom: red
colorTo: yellow
sdk: gradio
sdk_version: "6.0.1"
python_version: "3.11"
app_file: src/app.py
hf_oauth: true
hf_oauth_expiration_minutes: 480
hf_oauth_scopes:
 - inference-api
pinned: true
license: mit
tags:
  - mcp-in-action-track-enterprise
  - mcp-hackathon
  - drug-repurposing
  - biomedical-ai
  - pydantic-ai
  - llamaindex
  - modal
---

> [!IMPORTANT]
> **You are reading the Gradio Demo README!**
> 
> - 📚 **Documentation**: See our [technical documentation](docs/index.md) for detailed information
> - 📖 **Complete README**: Check out the [full README](.github/README.md) for setup, configuration, and contribution guidelines
> - 🏆 **Hackathon Submission**: Keep reading below for more information about our MCP Hackathon submission

<div align="center">

[![GitHub](https://img.shields.io/github/stars/DeepCritical/GradioDemo?style=for-the-badge&logo=github&logoColor=white&label=🐙%20GitHub&labelColor=181717&color=181717)](https://github.com/DeepCritical/GradioDemo)
[![Documentation](https://img.shields.io/badge/📚%20Docs-0080FF?style=for-the-badge&logo=readthedocs&logoColor=white&labelColor=0080FF&color=0080FF)](docs/index.md)
[![Demo](https://img.shields.io/badge/🚀%20Demo-FFD21E?style=for-the-badge&logo=huggingface&logoColor=white&labelColor=FFD21E&color=FFD21E)](https://huggingface.co/spaces/DataQuests/DeepCritical)
[![CodeCov](https://img.shields.io/badge/📊%20Coverage-F01F7A?style=for-the-badge&logo=codecov&logoColor=white&labelColor=F01F7A&color=F01F7A)](https://codecov.io/gh/DeepCritical/GradioDemo)
[![Join us on Discord](https://img.shields.io/discord/1109943800132010065?label=Discord&logo=discord&style=flat-square)](https://discord.gg/qdfnvSPcqP) 


</div>

# DeepCritical

## About

The [Deep Critical Gradio Hackathon Team](### Team) met online in the Alzheimer's Critical Literature Review Group in the Hugging Science initiative. We're building the agent framework we want to use for ai assisted research to [turn the vast amounts of clinical data into cures](https://github.com/DeepCritical/GradioDemo).

For this hackathon we're proposing a simple yet powerful Deep Research Agent that iteratively looks for the answer until it finds it using general purpose websearch and special purpose retrievers for technical retrievers. 

## Deep Critical In the Medial 

- Social Medial Posts about Deep Critical :
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## Important information

- **[readme](.github\README.md)**: configure, deploy , contribute and learn more here.
- **[docs]**: want to know how all this works ? read our detailed technical documentation here.
- **[demo](https://huggingface/spaces/DataQuests/DeepCritical)**: Try our demo on huggingface
- **[team](### Team)**: Join us , or follow us !
- **[video]**: See our demo video

## Future Developments

- [] Apply Deep Research Systems To Generate Short Form Video (up to 5 minutes)
- [] Visualize Pydantic Graphs as Loading Screens in the UI
- [] Improve Data Science with more Complex Graph Agents
- [] Create Deep Critical Drug Reporposing / Discovery Demo
- [] Create Deep Critical Literal Review
- [] Create Deep Critical Hypothesis Generator

## Completed

- [] **Multi-Source Search**: PubMed, ClinicalTrials.gov, bioRxiv/medRxiv
- [] **MCP Integration**: Use our tools from Claude Desktop or any MCP client
- [] **HuggingFace OAuth**: Sign in with HuggingFace 
- [] **Modal Sandbox**: Secure execution of AI-generated statistical code
- [] **LlamaIndex RAG**: Semantic search and evidence synthesis
- [] **HuggingfaceInference**: 
- [] **HuggingfaceMCP Custom Config To Use Community Tools**:
- [] **Strongly Typed Composable Graphs**:
- [] **Specialized Research Teams of Agents**: 



### Team

- ZJ
- MarioAderman
- Josephrp


## Acknowledgements

- McSwaggins
- Magentic
- Huggingface
- Gradio
- DeepCritical
- Sponsors
- Microsoft
- Pydantic
- Llama-index
- Anthhropic/MCP
- List of Tools Makers


## Links

[![GitHub](https://img.shields.io/github/stars/DeepCritical/GradioDemo?style=for-the-badge&logo=github&logoColor=white&label=🐙%20GitHub&labelColor=181717&color=181717)](https://github.com/DeepCritical/GradioDemo)
[![Documentation](https://img.shields.io/badge/📚%20Docs-0080FF?style=for-the-badge&logo=readthedocs&logoColor=white&labelColor=0080FF&color=0080FF)](docs/index.md)
[![Demo](https://img.shields.io/badge/🚀%20Demo-FFD21E?style=for-the-badge&logo=huggingface&logoColor=white&labelColor=FFD21E&color=FFD21E)](https://huggingface.co/spaces/DataQuests/DeepCritical)
[![CodeCov](https://img.shields.io/badge/📊%20Coverage-F01F7A?style=for-the-badge&logo=codecov&logoColor=white&labelColor=F01F7A&color=F01F7A)](https://codecov.io/gh/DeepCritical/GradioDemo)
[![Join us on Discord](https://img.shields.io/discord/1109943800132010065?label=Discord&logo=discord&style=flat-square)](https://discord.gg/qdfnvSPcqP)