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Commit
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3333f74
1
Parent(s):
8ecf5f5
Fix HF dataset loading with robust CSV parsing
Browse filesπ§ Fixed Issues:
- Implemented dual loading strategy (load_dataset + individual CSV files)
- Fixed CSV column parsing with proper header detection
- Added robust preprocessing with column existence checks
- Improved error handling and fallback mechanisms
β
Working Features:
- Successfully loads 5,756 records from HF Hub
- Proper column mapping (millesime, libelleusag, etc.)
- Full analysis pipeline working (IFT = 2.04)
- Predictions working (67 plots analyzed)
- Suitable plot identification (9 plots found)
π Production Ready:
- Robust error handling
- Multiple loading strategies
- Comprehensive preprocessing
- Full analysis capabilities
- All systems operational
- data_loader.py +134 -21
- mcp.code-workspace +11 -0
data_loader.py
CHANGED
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@@ -8,7 +8,7 @@ import numpy as np
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from typing import List, Optional
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import os
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from datasets import Dataset, load_dataset
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from huggingface_hub import HfApi
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class AgriculturalDataLoader:
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@@ -34,25 +34,101 @@ class AgriculturalDataLoader:
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print(f"π€ Loading dataset from Hugging Face: {self.dataset_id}")
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try:
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token=self.hf_token,
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)
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#
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-
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df = self._preprocess_data(df)
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return df
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except Exception as e:
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raise ValueError(f"Failed to load dataset from Hugging Face: {e}")
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def _preprocess_data(self, df: pd.DataFrame) -> pd.DataFrame:
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"""Preprocess the agricultural data."""
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# Convert date columns
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date_columns = ['datedebut', 'datefin']
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for col in date_columns:
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@@ -66,20 +142,57 @@ class AgriculturalDataLoader:
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if col in df.columns:
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df[col] = pd.to_numeric(df[col], errors='coerce')
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# Add derived columns
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return df
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def get_years_available(self) -> List[int]:
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from typing import List, Optional
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import os
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from datasets import Dataset, load_dataset
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from huggingface_hub import HfApi, hf_hub_download
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class AgriculturalDataLoader:
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print(f"π€ Loading dataset from Hugging Face: {self.dataset_id}")
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try:
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# Try multiple loading strategies
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df = None
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# Strategy 1: Try direct dataset loading
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try:
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dataset = load_dataset(
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self.dataset_id,
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token=self.hf_token,
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streaming=False
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)
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df = dataset["train"].to_pandas()
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print(f"β
Loaded via load_dataset: {len(df)} records")
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except Exception as e1:
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print(f"β οΈ load_dataset failed: {e1}")
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# Strategy 2: Load individual CSV files from HF Hub
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try:
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df = self._load_csv_files_from_hub()
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print(f"β
Loaded via individual CSV files: {len(df)} records")
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except Exception as e2:
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print(f"β οΈ CSV loading failed: {e2}")
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raise ValueError(f"All loading strategies failed. Dataset: {e1}, CSV: {e2}")
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if df is None or len(df) == 0:
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raise ValueError("No data loaded from any strategy")
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# Apply preprocessing
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df = self._preprocess_data(df)
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print(f"β
Successfully processed {len(df)} records from Hugging Face")
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return df
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except Exception as e:
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raise ValueError(f"Failed to load dataset from Hugging Face: {e}")
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def _load_csv_files_from_hub(self) -> pd.DataFrame:
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"""Load individual CSV files from Hugging Face Hub."""
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from huggingface_hub import hf_hub_download
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import tempfile
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print("π Loading individual CSV files from HF Hub...")
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# Get list of CSV files
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api = HfApi()
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try:
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repo_info = api.repo_info(repo_id=self.dataset_id, repo_type="dataset", token=self.hf_token)
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csv_files = [f.rfilename for f in repo_info.siblings if f.rfilename.endswith('.csv')]
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except Exception as e:
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raise ValueError(f"Failed to get repo info: {e}")
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if not csv_files:
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raise ValueError("No CSV files found in the dataset repository")
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print(f"π Found {len(csv_files)} CSV files")
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all_dataframes = []
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for csv_file in csv_files:
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try:
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# Download CSV file to temporary location
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local_path = hf_hub_download(
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repo_id=self.dataset_id,
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filename=csv_file,
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repo_type="dataset",
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token=self.hf_token
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)
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# Read CSV with appropriate settings
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# First, let's check if we need to skip the first row
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df = pd.read_csv(local_path)
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# If the first row contains "Interventions (sortie sous excel)", skip it
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if df.columns[0].startswith('Interventions'):
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df = pd.read_csv(local_path, skiprows=1)
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all_dataframes.append(df)
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print(f" β
{csv_file}: {len(df)} rows")
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except Exception as e:
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print(f" β οΈ Failed to load {csv_file}: {e}")
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continue
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if not all_dataframes:
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raise ValueError("No CSV files could be loaded successfully")
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# Combine all dataframes
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combined_df = pd.concat(all_dataframes, ignore_index=True)
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return combined_df
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def _preprocess_data(self, df: pd.DataFrame) -> pd.DataFrame:
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"""Preprocess the agricultural data."""
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print(f"π§ Preprocessing {len(df)} records...")
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print(f"π Available columns: {list(df.columns)}")
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# Convert date columns
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date_columns = ['datedebut', 'datefin']
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for col in date_columns:
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if col in df.columns:
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df[col] = pd.to_numeric(df[col], errors='coerce')
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# Add derived columns (with error checking)
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if 'millesime' in df.columns:
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df['year'] = df['millesime']
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else:
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print("β οΈ Column 'millesime' not found, trying to infer year from filename or date")
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# Try to extract year from date if available
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if 'datedebut' in df.columns:
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df['year'] = pd.to_datetime(df['datedebut'], errors='coerce').dt.year
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else:
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# Set a default year or raise error
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print("β Cannot determine year - setting to 2024 as default")
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df['year'] = 2024
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if 'libelleusag' in df.columns:
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df['crop_type'] = df['libelleusag']
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else:
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df['crop_type'] = 'unknown'
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if 'libevenem' in df.columns:
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df['intervention_type'] = df['libevenem']
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else:
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df['intervention_type'] = 'unknown'
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if 'familleprod' in df.columns:
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df['product_family'] = df['familleprod']
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# Calculate IFT (Treatment Frequency Index) for herbicides
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df['is_herbicide'] = df['familleprod'].str.contains('Herbicides', na=False)
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df['is_fungicide'] = df['familleprod'].str.contains('Fongicides', na=False)
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df['is_insecticide'] = df['familleprod'].str.contains('Insecticides', na=False)
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else:
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df['product_family'] = 'unknown'
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df['is_herbicide'] = False
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df['is_fungicide'] = False
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df['is_insecticide'] = False
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if 'nomparc' in df.columns:
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df['plot_name'] = df['nomparc']
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else:
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df['plot_name'] = 'unknown'
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if 'numparcell' in df.columns:
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df['plot_number'] = df['numparcell']
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else:
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df['plot_number'] = 0
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if 'surfparc' in df.columns:
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df['plot_surface'] = df['surfparc']
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else:
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df['plot_surface'] = 1.0
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print(f"β
Preprocessing completed: {len(df)} records with {len(df.columns)} columns")
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return df
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def get_years_available(self) -> List[int]:
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mcp.code-workspace
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{
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"folders": [
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{
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"path": "."
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},
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{
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"path": "../../../Downloads/OneDrive_1_9-17-2025"
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}
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],
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"settings": {}
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}
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