/**
 * Copyright © 2011-2014 EMBL - European Bioinformatics Institute
 * 
 * Licensed under the Apache License, Version 2.0 (the "License"); 
 * you may not use this file except in compliance with the License.  
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package uk.ac.ebi.phenotype.pojo;

/**
 * 
 * A concrete representation of phenotype parameter option.
 * 
 * @author Gautier Koscielny (EMBL-EBI) <koscieln@ebi.ac.uk>
 * @version $Revision: 2227 $
 *  @since February 2012
 */

import javax.persistence.Column;
import javax.persistence.Entity;
import javax.persistence.GeneratedValue;
import javax.persistence.GenerationType;
import javax.persistence.Id;
import javax.persistence.Table;

@Entity
@Table(name = "phenotype_parameter_option")
public class ParameterOption {
	
	/**
	 * MySQL auto increment
	 * GenerationType.AUTO won't work
	 */
	@Id
	@GeneratedValue(strategy=GenerationType.IDENTITY)
	@Column(name = "id")
	private Integer id;
	
	@Column(name = "name")
	private String name;
	
        @Column(name = "description")	
	private String description;

	/**
	 * @return the id
	 */
	public Integer getId() {
		return id;
	}
	/**
	 * @param id the id to set
	 */
	public void setId(Integer id) {
		this.id = id;
	}

	/**
	 * 
	 */
	public ParameterOption() {
		super();
	}
	/**
	 * @return the name
	 */
	public String getName() {
		return name;
	}
	/**
	 * @param name the name to set
	 */
	public void setName(String name) {
		this.name = name;
	}
	/**
	 * @return the description
	 */
	public String getDescription() {
		return description;
	}
	/**
	 * @param description the description to set
	 */
	public void setDescription(String description) {
		this.description = description;
	}
	/* (non-Javadoc)
	 * @see java.lang.Object#toString()
	 */
	@Override
	public String toString() {
		return "ParameterOption [id=" + id + ", name=" + name
				+ ", description=" + description + "]";
	}
	
	
}

/**
 * Copyright © 2011-2014 EMBL - European Bioinformatics Institute
 *
 * Licensed under the Apache License, Version 2.0 (the "License"); 
 * you may not use this file except in compliance with the License.  
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package uk.ac.ebi.phenotype.pojo;

/**
 *
 * A concrete representation of phenotype parameter option.
 *
 * @author Gautier Koscielny (EMBL-EBI) <koscieln@ebi.ac.uk>
 * @version $Revision: 2227 $
 * @since February 2012
 */

import javax.persistence.*;


@Entity
@Table(name = "phenotype_parameter_option")
public class ParameterOption {

	/**
	 * MySQL auto increment
	 * GenerationType.AUTO won't work
	 */
	@Id
	@GeneratedValue(strategy = GenerationType.IDENTITY)
	@Column(name = "id")
	private Integer id;

	@Column(name = "name")
	private String name;

	@Column(name = "description")
	private String description;

	@Column(name = "normal")
	private Boolean normalCategory;



	/**
	 * @return the id
	 */
	public Integer getId() {

		return id;
	}


	/**
	 * @param id the id to set
	 */
	public void setId(Integer id) {

		this.id = id;
	}


	/**
	 *
	 */
	public ParameterOption() {

		super();
	}


	/**
	 * @return the name
	 */
	public String getName() {

		return name;
	}


	/**
	 * @param name the name to set
	 */
	public void setName(String name) {

		this.name = name;
	}


	/**
	 * @return the description
	 */
	public String getDescription() {

		return description;
	}


	/**
	 * @param description the description to set
	 */
	public void setDescription(String description) {

		this.description = description;
	}


	/**
	 * @return true if this category is an expected normal category
	 */
	public Boolean getNormalCategory() {

		return normalCategory;
	}


	/**
	 * @param normalCategory set if the category is normal
	 */
	public void setNormalCategory(Boolean normalCategory) {

		this.normalCategory = normalCategory;
	}


	/* (non-Javadoc)
	 * @see java.lang.Object#toString()
	 */
	@Override
	public String toString() {

		return "ParameterOption [id=" + id
			+ ", name=" + name
			+ ", normalCategory=" + normalCategory
			+ ", description=" + description + "]";
	}


}

add normal flag (to indicate if the option is the "as expected" option when looking at the WT)