package org.ensembl.healthcheck.testgroup;

import org.ensembl.healthcheck.GroupOfTests;
import org.ensembl.healthcheck.testcase.eg_core.EGCompareVariationSchema;
import org.ensembl.healthcheck.testcase.variation.AlleleFrequencies;
import org.ensembl.healthcheck.testcase.variation.CompareVariationSchema;
import org.ensembl.healthcheck.testcase.variation.EmptyVariationTables;
import org.ensembl.healthcheck.testcase.variation.FlankingUpDownSeq;
import org.ensembl.healthcheck.testcase.variation.ForeignKeyCoreId;
import org.ensembl.healthcheck.testcase.variation.IndividualType;
import org.ensembl.healthcheck.testcase.variation.Meta;
import org.ensembl.healthcheck.testcase.variation.Meta_coord;
import org.ensembl.healthcheck.testcase.variation.StructuralVariation;
import org.ensembl.healthcheck.testcase.variation.TranscriptVariation;
import org.ensembl.healthcheck.testcase.variation.VFCoordinates;
import org.ensembl.healthcheck.testcase.variation.VariationForeignKeys;
import org.ensembl.healthcheck.testcase.variation.VariationSet;

/**
 * Group of tests for variation databases
 * 
 * @author dstaines
 * 
 */
public class EGVariation extends GroupOfTests {

	public EGVariation() {
		addTest(
			EGCommon.class,

			AlleleFrequencies.class, 
			CompareVariationSchema.class,
			EGCompareVariationSchema.class,
			EmptyVariationTables.class, 
			FlankingUpDownSeq.class,
			ForeignKeyCoreId.class, 
			IndividualType.class, 
			Meta_coord.class,
			Meta.class, 
			StructuralVariation.class,
			TranscriptVariation.class, 
			VariationForeignKeys.class,
			VariationSet.class, 
			VFCoordinates.class
		);
	}
}

package org.ensembl.healthcheck.testgroup;

import org.ensembl.healthcheck.GroupOfTests;
import org.ensembl.healthcheck.testcase.eg_core.EGCompareVariationSchema;
import org.ensembl.healthcheck.testcase.variation.AlleleFrequencies;
import org.ensembl.healthcheck.testcase.variation.CompareVariationSchema;
import org.ensembl.healthcheck.testcase.variation.EmptyVariationTables;
import org.ensembl.healthcheck.testcase.variation.FlankingUpDownSeq;
import org.ensembl.healthcheck.testcase.variation.ForeignKeyCoreId;
import org.ensembl.healthcheck.testcase.variation.IndividualType;
import org.ensembl.healthcheck.testcase.variation.Meta;
import org.ensembl.healthcheck.testcase.variation.Meta_coord;
import org.ensembl.healthcheck.testcase.variation.StructuralVariation;
import org.ensembl.healthcheck.testcase.variation.TranscriptVariation;
import org.ensembl.healthcheck.testcase.variation.VFCoordinates;
import org.ensembl.healthcheck.testcase.variation.VariationForeignKeys;
import org.ensembl.healthcheck.testcase.variation.VariationSet;

/**
 * Group of tests for variation databases
 * 
 * @author dstaines
 * 
 */
public class EGVariation extends GroupOfTests {

	public EGVariation() {
		addTest(
			EGCommon.class,

			AlleleFrequencies.class, 
			CompareVariationSchema.class,
			EGCompareVariationSchema.class,
			EmptyVariationTables.class, 
			ForeignKeyCoreId.class, 
			IndividualType.class, 
			Meta_coord.class,
			Meta.class, 
			StructuralVariation.class,
			TranscriptVariation.class, 
			VariationForeignKeys.class,
			VariationSet.class, 
			VFCoordinates.class
		);
	}
}

Remove the FlankingSequence test